Gene detail information of Glyur000439s00019022.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13020.46.00E-149Protein kinase superfamily protein
NRXP_004510241.10PREDICTED: serine/threonine-protein kinase MHK-like isoform X1 [Cicer arietinum]
COGYP_007298824.14.00E-27serine/threonine protein kinase [Thermoanaerobacterium thermosaccharolyticum M0795]
Swissprottr|P43294|MHK_ARATH0Serine/threonine-protein kinase MHK
trEMBLtr|G7LF72|G7LF72_MEDTR0Cyclin-dependent kinase {ECO:0000313|EMBL:AET01430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00439158563166346+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.1.1
EAR motif-containing Proteinsother


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000439s00019022.1PF00069.20Pkinase142942.40E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.901
SRR1783600control21.078
SRR1783602moderate drought stress23.875
SRR1811619moderate drought stress24.127

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.095
DRR006520Root Summer glycyrrhizin high producing strain26.492
DRR006521Root Winter glycyrrhizin high producing strain7.909
DRR006522Root Winter glycyrrhizin high producing strain6.690
DRR006523Root Summer glycyrrhizin low producing strain17.798
DRR006524Root Summer glycyrrhizin low producing strain18.286
DRR006525Leaf Summer glycyrrhizin high producing strain19.308
DRR006526Leaf Summer glycyrrhizin high producing strain18.820

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.165
SRR2868004Drought Stress(Tissue:root)40.655
SRR2967015Control (Tissue:root)55.108

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.950
SRR9715740Leave43.303
SRR9715741Leave29.961
SRR9715739Root9.039
SRR9715742Root13.083
SRR9715743Root12.698

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.488
SRR8749028MeJA induced 9h40.317
SRR8749029MeJA induced 9h27.435
SRR8749030Uninduced34.938
SRR8749031Uninduced21.370
SRR8749032Uninduced18.605

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.296
SRR8400027Control-Root41.158

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved