Gene detail information of Glyur000440s00021856.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT3G11050.1 | 1.00E-34 | ferritin 2 |
NR | XP_004491012.1 | 9.45E-55 | PREDICTED: ferritin-2, chloroplastic-like isoform X2 [Cicer arietinum] |
Swissprot | tr|Q41709|FRI2_VIGUN | 7.00E-51 | Ferritin-2, chloroplastic (Precursor) |
trEMBL | tr|A0A072UGM5|A0A072UGM5_MEDTR | 1.00E-50 | Ferritin {ECO:0000256|RuleBase:RU361145} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00440 | 12955 | 13552 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K00522 | FTH1 | EC:1.16.3.2 | Mineral absorption | map04978 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000440s00021856.1 | PF00210.19 | Ferritin | 129 | 164 | 5.80E-06 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 210.983 |
SRR1783600 | control | 214.669 |
SRR1783602 | moderate drought stress | 187.635 |
SRR1811619 | moderate drought stress | 181.073 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 226.597 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 226.205 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 203.651 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 190.925 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 141.947 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 143.360 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 81.819 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 82.358 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 15.919 |
SRR2868004 | Drought Stress(Tissue:root) | 3.382 |
SRR2967015 | Control (Tissue:root) | 22.881 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 2.324 |
SRR9715740 | Leave | 6.337 |
SRR9715741 | Leave | 1.855 |
SRR9715739 | Root | 6.192 |
SRR9715742 | Root | 3.963 |
SRR9715743 | Root | 3.853 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 1.497 |
SRR8749028 | MeJA induced 9h | 2.442 |
SRR8749029 | MeJA induced 9h | 2.951 |
SRR8749030 | Uninduced | 0.770 |
SRR8749031 | Uninduced | 0.343 |
SRR8749032 | Uninduced | 22.435 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 19.627 |
SRR8400027 | Control-Root | 15.501 |