Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000440s00021870.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51740.1	0	inflorescence meristem receptor-like kinase 2
NR	XP_003545217.2	0	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max]
COG	YP_004775215.1	2.00E-55	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9SCT4\|IMK2_ARATH	0	Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 (Precursor)
trEMBL	tr\|K7M539\|K7M539_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G06051.1}

Sequence

Transcript Sequence

>Glyur000440s00021870.1
ATGGACACTACTAGAGAGAAGAAGAAGAAGAAGAAGAAGAAAACTGATCAAATTTTGCAACTTGGGATGAGAAATGCAGCAGATTGGCACGACCCACTTCATTTTTTCAGGTTGTTTCTCTGCTGCTTCTTCTGGGTACACTGTTTGTGGTTTCTTCTGCTGCTGCTACCAGTGAAGCCCGTTTTGGGGGAAGAGCGTTGGGATGGGGTGGTTGTGACACAGNCAAACTTCTTGGCACTTCAAGCATTCAAGCAAGAGTTGGTTGATCCCAAAGGGTTCTTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGCTTGGGTTGGGATCAAGTGTGCTCAGGGACAGGTCATTGTGATCCAGCTTCCATGGAAGGGGTTGAAGGGGCGCATCACTGAGAGGATTGGACAACTTCAAGGGCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCATCATTGGGACTTCTCCTCAATCTAAGAGGGGTTCAGCTGTTCAATAACCGGTTAACTGGGTCAATTCCTCTTTCATTAGGTTCCTGTACATTGCTTCAGTCTGTAGACCTCAGCAACAATTTGCTCACAGGGACAATCCCTGATACCCTTGGGAATTCCACTAAGCTTTATTGGCTTAACTTGAGCCTCAATTCCTTCTCTGGTCCAATACCAGCTACCCTAACTCGCTTAACTTCTCTCACCTTCATATCTCTCCAACACAATAACCTCTCAGGTTCTATTCCTAGCTCATGGGGTGGTAGCTTGAGGAATGGCTTCTTTCGGCTTCAAAATCTGATCTTGGATCATAACTTGTTGACCGGAAGCATTCCTGCTTCTTTGGGCAGCTTAAGAGAACTCAGAGAGATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATTGGAAGCCTTTCTAGGCTTAAGACAGTAGATTTGTCTAATAATGCCTTGAATGGAAGCTTGCCTTCCACCCTCTCAAATTTATCCTCACTCACCCTCTTGAATGTAGAGAACAACCACTTTGAAAATCAAATCCCAGAAGCTTTAGGCAGATTACATAATCTTTCTGTTCTAGTATTGGGCAGAAACCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACATTTCAAAGCTTAATCAGCTTGATTTGTCGCTGAATAATCTAAGTGGAGAAATTCCAGACTCCTTTGGCAATCTAAGTAGTCTTAAATTCTTCAATGTTTCTCATAATAACCTCTCTGGTCCTGTTCCGACCTTACTTGCCCAGAAATTCAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAACCCTTCAACCCCATGTCCCTCACCAGCTCCTTCTGAGGGACAAAGAGTCCCTGCTGCACCTTCTGAAACATCAAAACCCCACCATCACAAGAAACTAGGCACCAAGGACATAATTCTCATAGTAGCAGGAGTGCTCCTTGCAGTCCTGATAACAATCTGCTGCATCCTGCTCTTCTGCCTGATCAGAAAAAGGGCAACATCAAATGCAGAGGGTGGCCAGGCCACAGGGAGAGGAGCTGCTGCTGCTGCCAGGACAGAAAAAGGAGTCCCCGTCACCGGAGAAGCTGAAGCGGGTGGCGAGAATGGAGGTAAACTGGTCCATTTTGATGGACCACTGGCATTTACGGCTGATGATCTCTTGTGTGCAACCGCGGAGATAATGGGAAAGAGCACCTATGGAACTGTGTATAAGGCAACATTAGAGGATGGTAGTCAAGCTGCAGTGAAAAGATTGAGGGAAAAGATCACTAAGAATCAGAGAGAATTTGAATCAGAAGTTAGTGTTCTAGGGAGAATTAGACACCCAAATCTTTTGGCACTGAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATACCTAAAGGAAGTCTTGCTTCTTTCTTACATGCTCGTGGACCTGAAACAACAATTGATTGGCCAACAAGGATGAATATAGCACAGGGCATGGCTCGTGGCTTGTTTTACCTTCATTCCCATGACAACATTATACATGGGAACCTTACATCCAGCAATGTCTTGCTTGATGAGAACACGAATGCTAAAATAGCAGATTTTGGTCTTTCAAGGTTGATGACAACTGCTGCTAATTCCAACGTGATTGCTACTGCTGGGGCATTAGGATACCGAGCACCTGAGCTATCAAAGCTTAAGAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTGATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGAGTGGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACGAATGAGGTTTTCGATGTTGAGTTGATGAGAGATGCATCAACATATGGTGATGAGTTGCTAAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCAAGTCCTCCAGCAGCTAGAAGAGATTAGACCACAGATATCAGCAAGTGCTTCTGGTGATGAAGGAGCCATCCCTTCCACCAGTGAATAAATTGGGTGTCAAGCATCATCATGTGTGACAATTTTTGCATTATTTATGTTTCTCTTTAGTGCTAGACATAATCGGTAGAACAGTAGTTTATCTCATTCTTTCATTCTTATATTAATTTTTGCCTGTTTGAGTGCTTGTGGTNCGTACATACTGCTGTGTTTTAATGTAGTAAGTGTTTCCTCTTTAACACTTCATTTCATAATGGAAGAGTTATCGTCCAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00440	117167	120246	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000440s00021870.1	PF08263.7	LRRNT_2	78	114	1.90E-08
Glyur000440s00021870.1	PF13855.1	LRR_8	190	249	2.30E-06
Glyur000440s00021870.1	PF13855.1	LRR_8	267	326	1.90E-06
Glyur000440s00021870.1	PF13855.1	LRR_8	363	422	1.20E-06
Glyur000440s00021870.1	PF00069.20	Pkinase	573	837	2.40E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.507
SRR1783600	control	0.528
SRR1783602	moderate drought stress	0.418
SRR1811619	moderate drought stress	0.423

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.580
DRR006520	Root Summer glycyrrhizin high producing strain	2.527
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.353
DRR006524	Root Summer glycyrrhizin low producing strain	0.394
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.396
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.396

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	9.213
SRR2868004	Drought Stress(Tissue:root)	3.937
SRR2967015	Control (Tissue:root)	5.014

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.231
SRR9715740	Leave	0.089
SRR9715741	Leave	0.484
SRR9715739	Root	0.868
SRR9715742	Root	0.615
SRR9715743	Root	0.632

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.057
SRR8749028	MeJA induced 9h	3.135
SRR8749029	MeJA induced 9h	1.537
SRR8749030	Uninduced	0.068
SRR8749031	Uninduced	0.110
SRR8749032	Uninduced	0.117

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	2.591
SRR8400027	Control-Root	2.079