Gene detail information of Glyur000441s00028792.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51350.10Leucine-rich repeat transmembrane protein kinase family protein
NRXP_003546623.10PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max]
COGYP_001192956.13.00E-50two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q9FII5|TDR_ARATH0Leucine-rich repeat receptor-like protein kinase TDR (Precursor)
trEMBLtr|I1MI35|I1MI35_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G26330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00441100887104456-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000441s00028792.1PF08263.7LRRNT_231745.40E-05
Glyur000441s00028792.1PF00560.28LRR_11271470.49
Glyur000441s00028792.1PF00560.28LRR_11992210.13
Glyur000441s00028792.1PF13855.1LRR_82963541.80E-08
Glyur000441s00028792.1PF13855.1LRR_84885451.20E-07
Glyur000441s00028792.1PF00069.20Pkinase7169452.30E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.088
SRR1783600control5.085
SRR1783602moderate drought stress7.747
SRR1811619moderate drought stress7.726

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.196
DRR006520Root Summer glycyrrhizin high producing strain16.014
DRR006521Root Winter glycyrrhizin high producing strain0.633
DRR006522Root Winter glycyrrhizin high producing strain0.643
DRR006523Root Summer glycyrrhizin low producing strain8.199
DRR006524Root Summer glycyrrhizin low producing strain8.223
DRR006525Leaf Summer glycyrrhizin high producing strain1.273
DRR006526Leaf Summer glycyrrhizin high producing strain1.246

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.187
SRR2868004Drought Stress(Tissue:root)11.487
SRR2967015Control (Tissue:root)16.072

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.553
SRR9715740Leave1.119
SRR9715741Leave1.263
SRR9715739Root1.163
SRR9715742Root7.117
SRR9715743Root6.231

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.472
SRR8749028MeJA induced 9h0.564
SRR8749029MeJA induced 9h0.221
SRR8749030Uninduced0.416
SRR8749031Uninduced0.353
SRR8749032Uninduced0.606

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.134
SRR8400027Control-Root18.864

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved