Gene detail information of Glyur000443s00016864.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G59350.33.00E-174Protein kinase superfamily protein
NRXP_003592830.10Protein kinase Pti1 [Medicago truncatula]
COGYP_005517714.11.00E-18serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|B9DFG5|PTI13_ARATH0PTI1-like tyrosine-protein kinase 3
trEMBLtr|G7IAZ5|G7IAZ5_MEDTR0Pti1-like kinase {ECO:0000313|EMBL:AES63081.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00443138686142981-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13436PTI1 EC:2.7.11.1 Plant-pathogen interaction map04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000443s00016864.1PF07714.12Pkinase_Tyr1494083.90E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control63.493
SRR1783600control63.227
SRR1783602moderate drought stress54.182
SRR1811619moderate drought stress54.037

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.221
DRR006520Root Summer glycyrrhizin high producing strain62.558
DRR006521Root Winter glycyrrhizin high producing strain179.661
DRR006522Root Winter glycyrrhizin high producing strain175.420
DRR006523Root Summer glycyrrhizin low producing strain104.485
DRR006524Root Summer glycyrrhizin low producing strain104.517
DRR006525Leaf Summer glycyrrhizin high producing strain51.730
DRR006526Leaf Summer glycyrrhizin high producing strain51.671

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)96.517
SRR2868004Drought Stress(Tissue:root)96.990
SRR2967015Control (Tissue:root)93.301

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave92.103
SRR9715740Leave84.984
SRR9715741Leave88.463
SRR9715739Root42.950
SRR9715742Root79.402
SRR9715743Root68.136

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h75.496
SRR8749028MeJA induced 9h135.677
SRR8749029MeJA induced 9h107.947
SRR8749030Uninduced75.798
SRR8749031Uninduced118.445
SRR8749032Uninduced89.541

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root78.087
SRR8400027Control-Root87.629

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved