Gene detail information of Glyur000444s00022234.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59470.2 | 3.00E-17 | Far-red impaired responsive (FAR1) family protein |
| NR | KHN15674.1 | 8.89E-112 | Protein FAR1-RELATED SEQUENCE 1 [Glycine soja] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 2.00E-16 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|K7N3N2|K7N3N2_SOYBN | 4.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G29541.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00444 | 72910 | 81466 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000444s00022234.3 | PF03101.10 | FAR1 | 75 | 161 | 9.00E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.980 |
| SRR1783600 | control | 5.004 |
| SRR1783602 | moderate drought stress | 5.975 |
| SRR1811619 | moderate drought stress | 5.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.816 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.684 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.430 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.051 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.173 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.151 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.450 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.746 |
| SRR2967015 | Control (Tissue:root) | 8.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.353 |
| SRR9715740 | Leave | 4.757 |
| SRR9715741 | Leave | 5.801 |
| SRR9715739 | Root | 0.562 |
| SRR9715742 | Root | 3.448 |
| SRR9715743 | Root | 3.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.247 |
| SRR8749028 | MeJA induced 9h | 7.597 |
| SRR8749029 | MeJA induced 9h | 5.272 |
| SRR8749030 | Uninduced | 7.508 |
| SRR8749031 | Uninduced | 8.344 |
| SRR8749032 | Uninduced | 7.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.913 |
| SRR8400027 | Control-Root | 8.935 |