Gene detail information of Glyur000445s00020006.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11160.11.00E-73adenine phosphoribosyltransferase 5
NRXP_010090622.13.88E-101Adenine phosphoribosyltransferase 2 [Morus notabilis]
COGYP_004214034.11.00E-53adenine phosphoribosyltransferase [Rahnella sp. Y9602]
Swissprottr|Q9LFP0|APT5_ARATH9.00E-93Adenine phosphoribosyltransferase 5
trEMBLtr|W9QW58|W9QW58_9ROSA1.00E-101Adenine phosphoribosyltransferase 2 {ECO:0000313|EMBL:EXB40158.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004457066572461+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00759APRT, apt EC:2.4.2.7 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006168  adenine salvage

GO:0009116  nucleoside metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003999  adenine phosphoribosyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000445s00020006.1PF00156.22Pribosyltran411631.00E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.437
SRR1783600control0.594
SRR1783602moderate drought stress0.151
SRR1811619moderate drought stress0.152

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.217
DRR006520Root Summer glycyrrhizin high producing strain1.193
DRR006521Root Winter glycyrrhizin high producing strain4.327
DRR006522Root Winter glycyrrhizin high producing strain4.954
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.875
DRR006526Leaf Summer glycyrrhizin high producing strain1.267

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.399
SRR2868004Drought Stress(Tissue:root)2.175
SRR2967015Control (Tissue:root)3.010

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.164
SRR9715740Leave2.115
SRR9715741Leave5.695
SRR9715739Root0.343
SRR9715742Root1.230
SRR9715743Root0.115

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.090
SRR8749028MeJA induced 9h1.252
SRR8749029MeJA induced 9h1.849
SRR8749030Uninduced0.121
SRR8749031Uninduced0.057
SRR8749032Uninduced0.095

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.872
SRR8400027Control-Root3.029

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved