Gene detail information of Glyur000445s00020020.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12460.10Leucine-rich repeat protein kinase family protein
NRAES94162.20LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004775215.12.00E-48RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGE4|Y1124_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (Precursor)
trEMBLtr|G7KEV5|G7KEV5_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES94162.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00445149067154038+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000445s00020020.1PF08263.7LRRNT_231713.70E-10
Glyur000445s00020020.1PF13516.1LRR_62422581
Glyur000445s00020020.1PF13855.1LRR_84114713.30E-09
Glyur000445s00020020.1PF00069.20Pkinase6058786.60E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.534
SRR1783600control35.501
SRR1783602moderate drought stress38.799
SRR1811619moderate drought stress35.301

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.113
DRR006520Root Summer glycyrrhizin high producing strain15.496
DRR006521Root Winter glycyrrhizin high producing strain3.835
DRR006522Root Winter glycyrrhizin high producing strain3.671
DRR006523Root Summer glycyrrhizin low producing strain18.705
DRR006524Root Summer glycyrrhizin low producing strain18.414
DRR006525Leaf Summer glycyrrhizin high producing strain15.905
DRR006526Leaf Summer glycyrrhizin high producing strain16.468

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.526
SRR2868004Drought Stress(Tissue:root)7.128
SRR2967015Control (Tissue:root)8.603

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.257
SRR9715740Leave13.627
SRR9715741Leave15.557
SRR9715739Root16.834
SRR9715742Root21.932
SRR9715743Root20.767

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.897
SRR8749028MeJA induced 9h1.559
SRR8749029MeJA induced 9h0.749
SRR8749030Uninduced1.196
SRR8749031Uninduced0.418
SRR8749032Uninduced0.346

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.874
SRR8400027Control-Root41.192

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved