Gene detail information of Glyur000446s00029762.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30000.10Dihydropterin pyrophosphokinase / Dihydropteroate synthase
NRXP_004490212.10PREDICTED: folic acid synthesis protein fol1-like isoform X1 [Cicer arietinum]
COGYP_001867639.12.00E-71dihydropteroate synthase [Nostoc punctiforme PCC 73102]
trEMBLtr|O04862|O04862_PEA0Dihydropterin pyrophosphokinase /dihydropteroate synthase {ECO:0000313|EMBL:CAA69903.1} (Precursor)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004463633039230+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13941folKP EC:2.7.6.3 2.5.1.15 Folate biosynthesis map00790


Gene Ontology

biological_process

GO:0009396  folic acid-containing compound biosynthetic process

GO:0042558  pteridine-containing compound metabolic process

GO:0044237  cellular metabolic process


molecular_function

GO:0003848  2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity

GO:0004156  dihydropteroate synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000446s00029762.1PF01288.15HPPK471721.30E-38
Glyur000446s00029762.1PF00809.17Pterin_bind2354551.30E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.605
SRR1783600control2.502
SRR1783602moderate drought stress2.584
SRR1811619moderate drought stress2.541

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.130
DRR006520Root Summer glycyrrhizin high producing strain4.221
DRR006521Root Winter glycyrrhizin high producing strain3.414
DRR006522Root Winter glycyrrhizin high producing strain3.247
DRR006523Root Summer glycyrrhizin low producing strain6.309
DRR006524Root Summer glycyrrhizin low producing strain6.230
DRR006525Leaf Summer glycyrrhizin high producing strain3.083
DRR006526Leaf Summer glycyrrhizin high producing strain2.983

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.774
SRR2868004Drought Stress(Tissue:root)5.552
SRR2967015Control (Tissue:root)5.435

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.626
SRR9715740Leave2.593
SRR9715741Leave2.110
SRR9715739Root2.734
SRR9715742Root3.471
SRR9715743Root4.747

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.719
SRR8749028MeJA induced 9h7.816
SRR8749029MeJA induced 9h9.016
SRR8749030Uninduced4.167
SRR8749031Uninduced3.701
SRR8749032Uninduced3.704

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.091
SRR8400027Control-Root4.314

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved