Gene detail

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Gene detail information of Glyur000446s00029769.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G38970.3	1.00E-107	brassinosteroid-6-oxidase 1
NR	XP_007153492.1	4.21E-156	hypothetical protein PHAVU_003G040300g [Phaseolus vulgaris]
COG	YP_001659897.1	3.00E-36	cytochrome P450 [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q69F95\|C85A_PHAVU	4.00E-139	Cytochrome P450 85A
trEMBL	tr\|V7C988\|V7C988_PHAVU	2.00E-156	Uncharacterized protein {ECO:0000313\|EMBL:ESW25486.1}

Sequence

Transcript Sequence

>Glyur000446s00029769.1
ATGTCAATGCAAGAAATAGTCATGTATAGTGTGCTGGCTTTGTTGTTTTGTGGATTCTTTGTAGTGCTGAAGTGGAACGAGATAAGGTACAGTAGGAAAGGAATGCCACCAGGAACAATGGGATGGCCTATTTTTGGTGAGACTGGAGGGTTTCTTAAACAAGGACCAGATTTCATGAAAGGCAAGAGAGCAAGGTATGGAAATCTCTTCAAGTCTCATGCATTAGGCTCTCCTGTTGTTATCAGCATGGATCCAGAACTCAACAGATACATCCTCCACAATGAAACAAAAGGTCTAATTCCAGGCTACCCNGTGTCCATGAGGAACATACTAGGGAATTGCAACATTGCTGAAGTTCATGGTGCTCTTCATAAACGTATCAGAGGGCCAATACTNTCATCCATTGGTCCGGCTGCAATCCGGGGTCATCTCTTGCCACAAGTTGACAAGTTTATGCAGCTTTTCCTTGACAATTGGGATGGTAAAAAAACCATTGATATTCAGCACAAAACCAAACAGATGGCATTCTTTGTGTCAATGAAACTGATTGTGGAAAATGAACCTAGTCCTTTCCATGAGGCCTTCAAAGCTACATTTGACAACATAACAAGGAAAAAAGTGGTTGCAACACTTAAAGAGGTTTTAACCAAGAGAAGATCTTCTCTGGCTACTCATACTGACATTCTTGATAAGCTGATGAGAAATGAGAATCTGGTCAAATACAAACTTAATGATGAAGAAATAATTGATCAAATAATCACATTCTTATATTCAGGGTATGAAACTGTATCGACTACTACAATGATGGCTGTCAAATACCTCCANGATAATCCTAGAGTTCTTGAAGTAGTCAGAGTGATTTTTGAAACATTGAGATTGGCTAACATTGTTAATGGGGTATTGAGGAAGACCACTAAAGATGTTGAACTGAATGGATTTAACATTCCTCAGGGATGGAGGGTTTATGTTTATACAAGGGAGACCAATTGTGATCCCTTTCTCTATCAAGAGCCTTTCAATTTTAACCCCTCCAGATGGCTGGTCAGTTTGCTCAATAAACAACAAGGTTATATACTTATGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00446	82133	85054	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP85A2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K12640	CYP85A2, BR6OX2	EC:1.14.-.-	Brassinosteroid biosynthesis	map00905

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000446s00029769.1	PF00067.17	p450	204	284	6.10E-09
Glyur000446s00029769.1	PF00067.17	p450	285	349	3.20E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.121
SRR1783600	control	0.140
SRR1783602	moderate drought stress	0.348
SRR1811619	moderate drought stress	0.326

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.176
DRR006520	Root Summer glycyrrhizin high producing strain	0.286
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.101
DRR006524	Root Summer glycyrrhizin low producing strain	0.101
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.052
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.052

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.606
SRR2868004	Drought Stress(Tissue:root)	1.137
SRR2967015	Control (Tissue:root)	0.875

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.036
SRR9715740	Leave	0.164
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.050
SRR9715743	Root	0.262

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.995
SRR8400027	Control-Root	3.637