Gene detail information of Glyur000446s00029771.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24240.10Leucine-rich repeat receptor-like protein kinase family protein
NRXP_007153491.10hypothetical protein PHAVU_003G040200g [Phaseolus vulgaris]
COGYP_004775215.19.00E-66RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LHP4|RCH2_ARATH0Receptor-like protein kinase 2 (Precursor)
trEMBLtr|V7C883|V7C883_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW25485.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00446122192125720+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000446s00029771.1PF08263.7LRRNT_238781.40E-05
Glyur000446s00029771.1PF12799.2LRR_41311671.70E-06
Glyur000446s00029771.1PF00560.28LRR_14204410.076
Glyur000446s00029771.1PF13855.1LRR_84675274.60E-09
Glyur000446s00029771.1PF00560.28LRR_15886060.072
Glyur000446s00029771.1PF07714.12Pkinase_Tyr7918935.40E-12
Glyur000446s00029771.1PF07714.12Pkinase_Tyr91010011.40E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.572
SRR1783600control1.648
SRR1783602moderate drought stress1.111
SRR1811619moderate drought stress1.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.101
DRR006520Root Summer glycyrrhizin high producing strain0.067
DRR006521Root Winter glycyrrhizin high producing strain0.034
DRR006522Root Winter glycyrrhizin high producing strain0.034
DRR006523Root Summer glycyrrhizin low producing strain0.178
DRR006524Root Summer glycyrrhizin low producing strain0.210
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.016
SRR2868004Drought Stress(Tissue:root)9.034
SRR2967015Control (Tissue:root)9.915

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.062
SRR9715740Leave0.000
SRR9715741Leave0.000
SRR9715739Root1.965
SRR9715742Root0.948
SRR9715743Root1.425

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.637
SRR8749028MeJA induced 9h6.129
SRR8749029MeJA induced 9h3.656
SRR8749030Uninduced0.099
SRR8749031Uninduced0.068
SRR8749032Uninduced0.474

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.312
SRR8400027Control-Root2.774

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved