Gene detail information of Glyur000446s00029772.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02230.13.00E-174reversibly glycosylated polypeptide 1
NRNP_001242893.10uncharacterized protein LOC100809983 [Glycine max]
COGYP_003535748.12.00E-16hypothetical protein HVO_1704 [Haloferax volcanii DS2]
Swissprottr|O04300|UPTG_PEA0Alpha-1,4-glucan-protein synthase [UDP-forming]
trEMBLtr|I1JEI0|I1JEI0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00446143824147041+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT75


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13379RGP, UTM EC:2.4.1.- 5.4.99.30 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


molecular_function

GO:0016866  intramolecular transferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000446s00029772.1PF03214.8RGP103464.10E-163


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control198.361
SRR1783600control193.222
SRR1783602moderate drought stress81.651
SRR1811619moderate drought stress76.062

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain101.179
DRR006520Root Summer glycyrrhizin high producing strain96.105
DRR006521Root Winter glycyrrhizin high producing strain98.223
DRR006522Root Winter glycyrrhizin high producing strain88.207
DRR006523Root Summer glycyrrhizin low producing strain104.675
DRR006524Root Summer glycyrrhizin low producing strain105.480
DRR006525Leaf Summer glycyrrhizin high producing strain34.811
DRR006526Leaf Summer glycyrrhizin high producing strain32.598

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.113
SRR2868004Drought Stress(Tissue:root)44.964
SRR2967015Control (Tissue:root)43.498

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.869
SRR9715740Leave26.744
SRR9715741Leave33.080
SRR9715739Root70.482
SRR9715742Root61.962
SRR9715743Root58.502

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h134.752
SRR8749028MeJA induced 9h77.842
SRR8749029MeJA induced 9h129.161
SRR8749030Uninduced38.220
SRR8749031Uninduced32.631
SRR8749032Uninduced74.167

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.492
SRR8400027Control-Root84.865

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved