Gene detail information of Glyur000447s00016639.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09540.1 | 8.00E-73 | myb domain protein 61 |
| NR | XP_003553691.1 | 8.98E-161 | PREDICTED: transcription factor MYB86-like [Glycine max] |
| Swissprot | tr|Q8LPH6|MYB86_ARATH | 1.00E-82 | Transcription factor MYB86 |
| trEMBL | tr|I1NBM2|I1NBM2_SOYBN | 3.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00447 | 37087 | 38773 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000447s00016639.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 4.90E-15 |
| Glyur000447s00016639.1 | PF00249.26 | Myb_DNA-binding | 67 | 110 | 6.50E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.080 |
| SRR1783600 | control | 0.080 |
| SRR1783602 | moderate drought stress | 0.083 |
| SRR1811619 | moderate drought stress | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.496 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.079 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.080 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.244 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.854 |
| SRR2967015 | Control (Tissue:root) | 9.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.458 |
| SRR9715740 | Leave | 0.111 |
| SRR9715741 | Leave | 0.285 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.743 |
| SRR8400027 | Control-Root | 1.224 |