Gene detail information of Glyur000448s00026711.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28250.2 | 7.00E-141 | Protein kinase superfamily protein |
| NR | NP_001237605.1 | 0 | protein kinase family protein precursor [Glycine max] |
| COG | YP_001958461.1 | 2.00E-21 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|Q8VYY5|NCRK_ARATH | 0 | Receptor-like serine/threonine-protein kinase NCRK (Precursor) |
| trEMBL | tr|C6ZRN0|C6ZRN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G29893.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00448 | 15516 | 19349 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000448s00026711.1 | PF00069.20 | Pkinase | 212 | 485 | 3.00E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.426 |
| SRR1783600 | control | 3.503 |
| SRR1783602 | moderate drought stress | 5.352 |
| SRR1811619 | moderate drought stress | 5.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.389 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.697 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.875 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.739 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.982 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.259 |
| SRR2967015 | Control (Tissue:root) | 1.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.258 |
| SRR9715740 | Leave | 0.036 |
| SRR9715741 | Leave | 0.074 |
| SRR9715739 | Root | 0.935 |
| SRR9715742 | Root | 3.202 |
| SRR9715743 | Root | 3.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.729 |
| SRR8749028 | MeJA induced 9h | 0.877 |
| SRR8749029 | MeJA induced 9h | 0.758 |
| SRR8749030 | Uninduced | 0.286 |
| SRR8749031 | Uninduced | 1.016 |
| SRR8749032 | Uninduced | 0.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.580 |
| SRR8400027 | Control-Root | 7.260 |