Gene detail information of Glyur000448s00026717.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08080.17.00E-86alpha carbonic anhydrase 7
NRXP_003541987.11.51E-160PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Glycine max]
COGYP_006464143.12.00E-43carbonic anhydrase [Solibacillus silvestris StLB046]
Swissprottr|Q8L817|ATCA7_ARATH5.00E-114Alpha carbonic anhydrase 7 (Precursor)
trEMBLtr|I1M4I7|I1M4I7_SOYBN6.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39920.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004488812990868-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01674cah EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0006730  one-carbon metabolic process


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000448s00026717.1PF00194.16Carb_anhydrase412651.30E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.482
SRR1783600control19.011
SRR1783602moderate drought stress36.998
SRR1811619moderate drought stress37.158

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.674
DRR006522Root Winter glycyrrhizin high producing strain0.721
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain6.370
DRR006526Leaf Summer glycyrrhizin high producing strain5.939

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.844
SRR2868004Drought Stress(Tissue:root)1.820
SRR2967015Control (Tissue:root)2.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.563
SRR9715740Leave2.006
SRR9715741Leave0.811
SRR9715739Root20.403
SRR9715742Root13.941
SRR9715743Root17.774

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.469
SRR8749029MeJA induced 9h0.068
SRR8749030Uninduced2.454
SRR8749031Uninduced0.902
SRR8749032Uninduced1.308

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root81.093
SRR8400027Control-Root72.563

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved