Gene detail information of Glyur000448s00026723.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45100.20UDP-Glycosyltransferase superfamily protein
NRXP_007150169.10hypothetical protein PHAVU_005G132400g [Phaseolus vulgaris]
COGYP_001275210.11.00E-19group 1 glycosyl transferase [Roseiflexus sp. RS-1]
trEMBLtr|V7BYN5|V7BYN5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW22163.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00448156934160205+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03857PIGA, GPI3 EC:2.4.1.198 Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000448s00026723.1PF08288.7PIGA121011.90E-42
Glyur000448s00026723.1PF00534.15Glycos_transf_11653239.30E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.189
SRR1783600control38.291
SRR1783602moderate drought stress61.952
SRR1811619moderate drought stress61.173

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain58.951
DRR006520Root Summer glycyrrhizin high producing strain58.493
DRR006521Root Winter glycyrrhizin high producing strain66.131
DRR006522Root Winter glycyrrhizin high producing strain64.146
DRR006523Root Summer glycyrrhizin low producing strain93.987
DRR006524Root Summer glycyrrhizin low producing strain94.508
DRR006525Leaf Summer glycyrrhizin high producing strain32.905
DRR006526Leaf Summer glycyrrhizin high producing strain32.443

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)69.835
SRR2868004Drought Stress(Tissue:root)82.507
SRR2967015Control (Tissue:root)86.648

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.932
SRR9715740Leave43.762
SRR9715741Leave62.898
SRR9715739Root16.682
SRR9715742Root33.675
SRR9715743Root30.607

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.806
SRR8749028MeJA induced 9h47.318
SRR8749029MeJA induced 9h30.668
SRR8749030Uninduced39.230
SRR8749031Uninduced24.807
SRR8749032Uninduced29.404

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root113.112
SRR8400027Control-Root103.517

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved