Gene detail information of Glyur000448s00026724.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57120.12.00E-125Protein kinase superfamily protein
NRXP_004487085.10PREDICTED: lysM domain receptor-like kinase 3-like [Cicer arietinum]
COGYP_003270491.18.00E-09serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|F4IB81|LYK3_ARATH3.00E-37LysM domain receptor-like kinase 3 (Precursor)
trEMBLtr|A0A072VCS7|A0A072VCS7_MEDTR0Tyrosine kinase family protein {ECO:0000313|EMBL:KEH39371.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00448161511162884-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000448s00026724.1PF00069.20Pkinase1424264.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.480
SRR1783600control16.574
SRR1783602moderate drought stress17.187
SRR1811619moderate drought stress17.259

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.648
DRR006520Root Summer glycyrrhizin high producing strain19.567
DRR006521Root Winter glycyrrhizin high producing strain20.056
DRR006522Root Winter glycyrrhizin high producing strain19.140
DRR006523Root Summer glycyrrhizin low producing strain45.083
DRR006524Root Summer glycyrrhizin low producing strain45.256
DRR006525Leaf Summer glycyrrhizin high producing strain11.724
DRR006526Leaf Summer glycyrrhizin high producing strain12.684

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.417
SRR2868004Drought Stress(Tissue:root)20.536
SRR2967015Control (Tissue:root)23.428

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.419
SRR9715740Leave23.817
SRR9715741Leave27.382
SRR9715739Root37.321
SRR9715742Root33.106
SRR9715743Root31.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.881
SRR8749028MeJA induced 9h75.893
SRR8749029MeJA induced 9h69.542
SRR8749030Uninduced42.059
SRR8749031Uninduced55.169
SRR8749032Uninduced51.220

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.593
SRR8400027Control-Root14.839

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved