Gene detail information of Glyur000449s00027095.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22250.11.00E-141aspartate aminotransferase
NRKHN44324.10Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [Glycine soja]
COGYP_003289551.11.00E-118class I and II aminotransferase [Rhodothermus marinus DSM 4252]
Swissprottr|E9L7A5|PAT_PETHY0Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|I1LN02|I1LN02_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G36200.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004495324258274-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15849PAT, AAT EC:2.6.1.1 2.6.1.78 2.6.1.79 Biosynthesis of amino acids map01230
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000449s00027095.1PF00155.16Aminotran_1_21061876.30E-13
Glyur000449s00027095.1PF00155.16Aminotran_1_21894264.70E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.066
SRR1783600control1.961
SRR1783602moderate drought stress0.504
SRR1811619moderate drought stress0.333

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.191
DRR006520Root Summer glycyrrhizin high producing strain0.160
DRR006521Root Winter glycyrrhizin high producing strain0.016
DRR006522Root Winter glycyrrhizin high producing strain0.081
DRR006523Root Summer glycyrrhizin low producing strain0.083
DRR006524Root Summer glycyrrhizin low producing strain0.090
DRR006525Leaf Summer glycyrrhizin high producing strain0.248
DRR006526Leaf Summer glycyrrhizin high producing strain0.392

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.680
SRR2868004Drought Stress(Tissue:root)0.966
SRR2967015Control (Tissue:root)0.277

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.052
SRR9715740Leave1.132
SRR9715741Leave3.533
SRR9715739Root0.675
SRR9715742Root4.908
SRR9715743Root5.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.950
SRR8749028MeJA induced 9h1.541
SRR8749029MeJA induced 9h1.813
SRR8749030Uninduced22.612
SRR8749031Uninduced11.385
SRR8749032Uninduced4.870

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.981
SRR8400027Control-Root2.714

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved