Gene detail information of Glyur000450s00024052.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46880.1 | 0 | homeobox-7 |
| NR | XP_006587604.1 | 0 | PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max] |
| Swissprot | tr|A2ZAI7|ROC3_ORYSI | 0 | Homeobox-leucine zipper protein ROC3 |
| trEMBL | tr|K7LF40|K7LF40_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G34061.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00450 | 57102 | 63040 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000450s00024052.1 | PF00046.24 | Homeobox | 95 | 150 | 5.20E-17 |
| Glyur000450s00024052.1 | PF01852.14 | START | 303 | 527 | 3.10E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.046 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.046 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.466 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.046 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.021 |
| SRR2967015 | Control (Tissue:root) | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.896 |
| SRR9715740 | Leave | 2.247 |
| SRR9715741 | Leave | 2.173 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.237 |
| SRR9715743 | Root | 0.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.005 |
| SRR8400027 | Control-Root | 1.012 |