Gene detail information of Glyur000450s00024058.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G32200.27.00E-166phospholipid/glycerol acyltransferase family protein
NRP30706.10RecName: Full=Glycerol-3-phosphate acyltransferase, chloroplastic; Short=GPAT; Flags: Precursor [Pisum sativum]
COGNP_220327.11.00E-61Glycerol-3-P Acyltransferase [Chlamydia trachomatis D/UW-3/CX]
Swissprottr|P30706|PLSB_PEA0Glycerol-3-phosphate acyltransferase, chloroplastic (Precursor)
trEMBLtr|O78672|O78672_VICFA0Putative glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AAD05164.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0045095053102426+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00630ATS1 EC:2.3.1.15 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0006650  glycerophospholipid metabolic process

GO:0008152  metabolic process


molecular_function

GO:0004366  glycerol-3-phosphate O-acyltransferase activity

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000450s00024058.1PF14829.1GPAT_N1031782.30E-36
Glyur000450s00024058.1PF01553.16Acyltransferase2183741.20E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control35.563
SRR1783600control35.700
SRR1783602moderate drought stress29.749
SRR1811619moderate drought stress29.893

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.339
DRR006520Root Summer glycyrrhizin high producing strain18.828
DRR006521Root Winter glycyrrhizin high producing strain12.531
DRR006522Root Winter glycyrrhizin high producing strain12.002
DRR006523Root Summer glycyrrhizin low producing strain31.173
DRR006524Root Summer glycyrrhizin low producing strain31.342
DRR006525Leaf Summer glycyrrhizin high producing strain45.632
DRR006526Leaf Summer glycyrrhizin high producing strain45.732

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.245
SRR2868004Drought Stress(Tissue:root)33.242
SRR2967015Control (Tissue:root)28.952

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.446
SRR9715740Leave76.678
SRR9715741Leave68.039
SRR9715739Root10.219
SRR9715742Root24.156
SRR9715743Root20.619

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.641
SRR8749028MeJA induced 9h61.968
SRR8749029MeJA induced 9h50.245
SRR8749030Uninduced46.733
SRR8749031Uninduced50.726
SRR8749032Uninduced27.671

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.320
SRR8400027Control-Root39.798

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved