Gene detail information of Glyur000451s00016533.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19690.10staurosporin and temperature sensitive 3-like A
NRXP_003592715.10Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A [Medicago truncatula]
COGYP_006861200.15.00E-48dolichyl-diphosphooligosaccharide--protein glycotransferase [Candidatus Nitrososphaera gargensis Ga9.2]
Swissprottr|Q93ZY3|STT3A_ARATH0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
trEMBLtr|G7IE81|G7IE81_MEDTR0Oligosaccharyltransferase subunit STT3 {ECO:0000313|EMBL:AES62966.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00451139747148709+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT66


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07151STT3 EC:2.4.99.18 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0004576  oligosaccharyl transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000451s00016533.1PF02516.9STT3205983.80E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control85.637
SRR1783600control85.418
SRR1783602moderate drought stress88.082
SRR1811619moderate drought stress86.574

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain74.807
DRR006520Root Summer glycyrrhizin high producing strain73.007
DRR006521Root Winter glycyrrhizin high producing strain73.927
DRR006522Root Winter glycyrrhizin high producing strain73.167
DRR006523Root Summer glycyrrhizin low producing strain61.931
DRR006524Root Summer glycyrrhizin low producing strain63.208
DRR006525Leaf Summer glycyrrhizin high producing strain34.324
DRR006526Leaf Summer glycyrrhizin high producing strain33.427

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)108.638
SRR2868004Drought Stress(Tissue:root)93.136
SRR2967015Control (Tissue:root)97.634

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.998
SRR9715740Leave46.750
SRR9715741Leave80.142
SRR9715739Root39.090
SRR9715742Root107.697
SRR9715743Root90.757

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h159.129
SRR8749028MeJA induced 9h96.696
SRR8749029MeJA induced 9h113.657
SRR8749030Uninduced55.268
SRR8749031Uninduced64.159
SRR8749032Uninduced51.924

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root116.271
SRR8400027Control-Root108.545

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved