Gene detail information of Glyur000452s00029825.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52440.12.00E-32Dof-type zinc finger DNA-binding family protein
NRXP_004502598.11.76E-95PREDICTED: dof zinc finger protein DOF5.1-like [Cicer arietinum]
Swissprottr|Q9SVC5|DOF35_ARATH1.00E-43Dof zinc finger protein DOF3.5
trEMBLtr|G7J664|G7J664_MEDTR4.00E-91Dof domain zinc finger protein {ECO:0000313|EMBL:AES72408.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004521240013287-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000452s00029825.1PF02701.10zf-Dof36911.70E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.112
SRR1783600control0.118
SRR1783602moderate drought stress0.086
SRR1811619moderate drought stress0.121

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.733
DRR006520Root Summer glycyrrhizin high producing strain0.727
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain6.511
DRR006524Root Summer glycyrrhizin low producing strain6.427
DRR006525Leaf Summer glycyrrhizin high producing strain0.684
DRR006526Leaf Summer glycyrrhizin high producing strain0.626

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.587
SRR2868004Drought Stress(Tissue:root)1.077
SRR2967015Control (Tissue:root)1.314

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.305
SRR9715740Leave0.424
SRR9715741Leave2.230
SRR9715739Root0.573
SRR9715742Root1.254
SRR9715743Root2.508

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.340
SRR8749028MeJA induced 9h24.356
SRR8749029MeJA induced 9h5.207
SRR8749030Uninduced10.049
SRR8749031Uninduced1.137
SRR8749032Uninduced2.234

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.292
SRR8400027Control-Root0.409

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved