Gene detail information of Glyur000452s00029827.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G53340.11.00E-128Galactosyltransferase family protein
NRAES72420.20beta-1,3-galactosyltransferase-like protein [Medicago truncatula]
Swissprottr|Q94F27|B3GTB_ARATH2.00E-160Probable beta-1,3-galactosyltransferase 11
trEMBLtr|G7J676|G7J676_MEDTR0Beta-1,3-galactosyltransferase-like protein {ECO:0000313|EMBL:AES72420.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004523536541699+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0008378  galactosyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000452s00029827.1PF01762.16Galactosyl_T1153109.00E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.771
SRR1783600control11.690
SRR1783602moderate drought stress11.069
SRR1811619moderate drought stress11.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.069
DRR006520Root Summer glycyrrhizin high producing strain13.172
DRR006521Root Winter glycyrrhizin high producing strain14.316
DRR006522Root Winter glycyrrhizin high producing strain13.823
DRR006523Root Summer glycyrrhizin low producing strain10.471
DRR006524Root Summer glycyrrhizin low producing strain11.431
DRR006525Leaf Summer glycyrrhizin high producing strain10.616
DRR006526Leaf Summer glycyrrhizin high producing strain10.236

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.458
SRR2868004Drought Stress(Tissue:root)19.066
SRR2967015Control (Tissue:root)17.119

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.249
SRR9715740Leave11.614
SRR9715741Leave12.081
SRR9715739Root2.152
SRR9715742Root7.134
SRR9715743Root6.981

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.784
SRR8749028MeJA induced 9h16.545
SRR8749029MeJA induced 9h11.042
SRR8749030Uninduced12.498
SRR8749031Uninduced7.483
SRR8749032Uninduced6.659

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.441
SRR8400027Control-Root17.083

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved