Gene detail information of Glyur000452s00029830.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23740.12.00E-153Leucine-rich repeat protein kinase family protein
NRKHN44239.10Putative inactive receptor kinase [Glycine soja]
COGYP_004579826.16.00E-22hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q9SUQ3|Y4374_ARATH0Probable inactive receptor kinase At4g23740 (Precursor)
trEMBLtr|I1JYV8|I1JYV8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G41770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004526217164911+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000452s00029830.1PF08263.7LRRNT_231682.10E-10
Glyur000452s00029830.1PF12799.2LRR_4971342.40E-08
Glyur000452s00029830.1PF00560.28LRR_11922120.16
Glyur000452s00029830.1PF00069.20Pkinase3375969.20E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.619
SRR1783600control2.591
SRR1783602moderate drought stress2.288
SRR1811619moderate drought stress2.280

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.397
DRR006520Root Summer glycyrrhizin high producing strain1.447
DRR006521Root Winter glycyrrhizin high producing strain0.236
DRR006522Root Winter glycyrrhizin high producing strain0.240
DRR006523Root Summer glycyrrhizin low producing strain1.476
DRR006524Root Summer glycyrrhizin low producing strain1.594
DRR006525Leaf Summer glycyrrhizin high producing strain0.282
DRR006526Leaf Summer glycyrrhizin high producing strain0.387

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.814
SRR2868004Drought Stress(Tissue:root)16.505
SRR2967015Control (Tissue:root)14.826

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.328
SRR9715740Leave0.754
SRR9715741Leave1.671
SRR9715739Root3.763
SRR9715742Root5.120
SRR9715743Root5.534

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.688
SRR8749028MeJA induced 9h24.676
SRR8749029MeJA induced 9h8.503
SRR8749030Uninduced30.098
SRR8749031Uninduced20.475
SRR8749032Uninduced10.218

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.545
SRR8400027Control-Root12.262

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved