Gene detail information of Glyur000453s00023810.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80660.1 | 0 | H(+)-ATPase 9 |
| NR | XP_003529784.1 | 0 | PREDICTED: plasma membrane ATPase 4-like [Glycine max] |
| COG | YP_005270382.1 | 0 | plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030] |
| Swissprot | tr|Q42556|PMA9_ARATH | 0 | ATPase 9, plasma membrane-type |
| trEMBL | tr|I1KGW2|I1KGW2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00453 | 27123 | 31529 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01535 | PMA1, PMA2 | EC:3.6.3.6 | Oxidative phosphorylation | map00190 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000453s00023810.1 | PF00122.15 | E1-E2_ATPase | 27 | 238 | 5.20E-55 |
| Glyur000453s00023810.1 | PF00702.21 | Hydrolase | 242 | 519 | 3.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.016 |
| SRR1783600 | control | 0.016 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.140 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.014 |
| SRR2967015 | Control (Tissue:root) | 0.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.022 |
| SRR9715740 | Leave | 0.136 |
| SRR9715741 | Leave | 0.144 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.051 |
| SRR9715743 | Root | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.093 |
| SRR8749028 | MeJA induced 9h | 0.033 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.234 |
| SRR8400027 | Control-Root | 0.363 |