Gene detail information of Glyur000454s00019910.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00300.21.00E-72fringe-related protein
NRXP_004492776.11.31E-141PREDICTED: probable receptor-like protein kinase At5g24010-like [Cicer arietinum]
Swissprottr|Q9FLW0|Y5241_ARATH1.00E-49Probable receptor-like protein kinase At5g24010 (Precursor)
trEMBLtr|V7B5Q3|V7B5Q3_PHAVU6.00E-136Uncharacterized protein {ECO:0000313|EMBL:ESW11796.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004544834249982+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000454s00019910.1PF12819.2Malectin_like51982.80E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control141.950
SRR1783600control143.543
SRR1783602moderate drought stress97.469
SRR1811619moderate drought stress97.572

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain117.057
DRR006520Root Summer glycyrrhizin high producing strain115.974
DRR006521Root Winter glycyrrhizin high producing strain50.827
DRR006522Root Winter glycyrrhizin high producing strain50.305
DRR006523Root Summer glycyrrhizin low producing strain222.059
DRR006524Root Summer glycyrrhizin low producing strain226.430
DRR006525Leaf Summer glycyrrhizin high producing strain93.212
DRR006526Leaf Summer glycyrrhizin high producing strain94.117

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)98.836
SRR2868004Drought Stress(Tissue:root)123.843
SRR2967015Control (Tissue:root)128.097

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave169.100
SRR9715740Leave173.030
SRR9715741Leave224.149
SRR9715739Root175.098
SRR9715742Root216.187
SRR9715743Root205.903

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h74.915
SRR8749028MeJA induced 9h78.787
SRR8749029MeJA induced 9h59.071
SRR8749030Uninduced54.455
SRR8749031Uninduced54.323
SRR8749032Uninduced63.319

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root87.448
SRR8400027Control-Root128.255

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved