Gene detail information of Glyur000455s00015989.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38280.20AMP deaminase, putative / myoadenylate deaminase, putative
NRXP_010104248.10AMP deaminase [Morus notabilis]
COGYP_661794.12.00E-06adenosine deaminase [Pseudoalteromonas atlantica T6c]
Swissprottr|O80452|AMPD_ARATH0AMP deaminase
trEMBLtr|W9RW60|W9RW60_9ROSA0AMP deaminase {ECO:0000313|EMBL:EXB99415.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00455102367113312-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01490AMPD EC:3.5.4.6 Purine metabolism map00230


Gene Ontology

biological_process

GO:0009168  purine ribonucleoside monophosphate biosynthetic process

GO:0032264  IMP salvage


molecular_function

GO:0003876  AMP deaminase activity

GO:0019239  deaminase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000455s00015989.1PF00962.17A_deaminase3988041.80E-117


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.012
SRR1783600control9.016
SRR1783602moderate drought stress9.602
SRR1811619moderate drought stress9.745

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.664
DRR006520Root Summer glycyrrhizin high producing strain9.745
DRR006521Root Winter glycyrrhizin high producing strain4.476
DRR006522Root Winter glycyrrhizin high producing strain4.458
DRR006523Root Summer glycyrrhizin low producing strain17.136
DRR006524Root Summer glycyrrhizin low producing strain17.534
DRR006525Leaf Summer glycyrrhizin high producing strain3.073
DRR006526Leaf Summer glycyrrhizin high producing strain2.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.469
SRR2868004Drought Stress(Tissue:root)10.083
SRR2967015Control (Tissue:root)11.047

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.139
SRR9715740Leave3.499
SRR9715741Leave4.854
SRR9715739Root1.092
SRR9715742Root7.192
SRR9715743Root5.671

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.840
SRR8749028MeJA induced 9h5.664
SRR8749029MeJA induced 9h6.239
SRR8749030Uninduced2.778
SRR8749031Uninduced2.011
SRR8749032Uninduced2.323

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.961
SRR8400027Control-Root9.376

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved