Gene detail information of Glyur000456s00017907.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11590.11.00E-45Integrase-type DNA-binding superfamily protein
NRNP_001237808.19.52E-69TINY [Glycine max]
Swissprottr|Q9LYD3|DREB3_ARATH6.00E-59Dehydration-responsive element-binding protein 3
trEMBLtr|I1MA08|I1MA08_SOYBN8.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G22740.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0045662417029-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000456s00017907.1PF00847.15AP2621126.80E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.035
SRR1783600control10.669
SRR1783602moderate drought stress17.231
SRR1811619moderate drought stress17.783

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.349
DRR006520Root Summer glycyrrhizin high producing strain10.366
DRR006521Root Winter glycyrrhizin high producing strain103.049
DRR006522Root Winter glycyrrhizin high producing strain101.543
DRR006523Root Summer glycyrrhizin low producing strain43.153
DRR006524Root Summer glycyrrhizin low producing strain46.624
DRR006525Leaf Summer glycyrrhizin high producing strain1.174
DRR006526Leaf Summer glycyrrhizin high producing strain1.671

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.314
SRR2868004Drought Stress(Tissue:root)11.728
SRR2967015Control (Tissue:root)17.304

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.857
SRR9715740Leave0.561
SRR9715741Leave0.811
SRR9715739Root88.942
SRR9715742Root29.983
SRR9715743Root35.786

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.599
SRR8749028MeJA induced 9h27.712
SRR8749029MeJA induced 9h60.031
SRR8749030Uninduced5.872
SRR8749031Uninduced5.784
SRR8749032Uninduced14.495

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.846
SRR8400027Control-Root20.872

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved