Gene detail information of Glyur000456s00017915.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28880.14.00E-151casein kinase I-like 3
NRXP_004498472.10PREDICTED: casein kinase I isoform delta-like [Cicer arietinum]
COGYP_634544.17.00E-17serine/threonine protein kinase Pkn2 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH3.00E-169Casein kinase I isoform delta-like
trEMBLtr|A0A072VDN0|A0A072VDN0_MEDTR0Casein kinase {ECO:0000313|EMBL:KEH39706.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004563356040181-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08960CSNK1E EC:2.7.11.1 Wnt signaling pathway map04310
Hedgehog signaling pathwaymap04340
Hedgehog signaling pathway - flymap04341
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Hippo signaling pathway - multiple speciesmap04392
FoxO signaling pathwaymap04068
Circadian rhythmmap04710
Circadian rhythm - flymap04711


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000456s00017915.1PF00069.20Pkinase532864.20E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.502
SRR1783600control0.475
SRR1783602moderate drought stress1.009
SRR1811619moderate drought stress0.936

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.460
DRR006520Root Summer glycyrrhizin high producing strain0.370
DRR006521Root Winter glycyrrhizin high producing strain0.548
DRR006522Root Winter glycyrrhizin high producing strain0.675
DRR006523Root Summer glycyrrhizin low producing strain2.411
DRR006524Root Summer glycyrrhizin low producing strain2.044
DRR006525Leaf Summer glycyrrhizin high producing strain1.322
DRR006526Leaf Summer glycyrrhizin high producing strain0.991

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.554
SRR2868004Drought Stress(Tissue:root)2.427
SRR2967015Control (Tissue:root)2.599

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.690
SRR9715740Leave1.005
SRR9715741Leave0.902
SRR9715739Root0.140
SRR9715742Root0.695
SRR9715743Root0.441

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.754
SRR8749028MeJA induced 9h2.343
SRR8749029MeJA induced 9h0.806
SRR8749030Uninduced0.556
SRR8749031Uninduced0.324
SRR8749032Uninduced0.172

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.304
SRR8400027Control-Root1.134

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved