Gene detail information of Glyur000456s00017928.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT4G32730.2 | 2.00E-167 | Homeodomain-like protein |
NR | XP_004498481.1 | 0 | PREDICTED: myb-related protein 3R-1-like isoform X2 [Cicer arietinum] |
Swissprot | tr|Q9S7G7|MB3R1_ARATH | 6.00E-152 | Myb-related protein 3R-1 |
trEMBL | tr|A0A072VFC6|A0A072VFC6_MEDTR | 0 | Transcription repressor MYB5 {ECO:0000313|EMBL:KEH40296.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00456 | 99042 | 104515 | - |
Gene family
Gene family | subfamily |
---|---|
Transcription Factors Family | MYB-related |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000456s00017928.1 | PF00249.26 | Myb_DNA-binding | 25 | 71 | 4.80E-17 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 6.330 |
SRR1783600 | control | 6.336 |
SRR1783602 | moderate drought stress | 4.140 |
SRR1811619 | moderate drought stress | 4.099 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 6.219 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 6.015 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 2.376 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 2.328 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 3.531 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 3.646 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.766 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.688 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 15.311 |
SRR2868004 | Drought Stress(Tissue:root) | 10.998 |
SRR2967015 | Control (Tissue:root) | 10.382 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 3.164 |
SRR9715740 | Leave | 1.848 |
SRR9715741 | Leave | 1.262 |
SRR9715739 | Root | 1.289 |
SRR9715742 | Root | 3.937 |
SRR9715743 | Root | 2.755 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 11.230 |
SRR8749028 | MeJA induced 9h | 10.045 |
SRR8749029 | MeJA induced 9h | 5.847 |
SRR8749030 | Uninduced | 2.459 |
SRR8749031 | Uninduced | 0.952 |
SRR8749032 | Uninduced | 1.212 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 14.206 |
SRR8400027 | Control-Root | 11.860 |