Gene detail information of Glyur000456s00017929.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11510.2 | 5.00E-15 | myb domain protein 3r-4 |
| NR | XP_007137183.1 | 3.62E-28 | hypothetical protein PHAVU_009G106700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9S7G7|MB3R1_ARATH | 1.00E-16 | Myb-related protein 3R-1 |
| trEMBL | tr|V7AU59|V7AU59_PHAVU | 1.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:ESW09177.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00456 | 104956 | 106394 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000456s00017929.1 | PF00249.26 | Myb_DNA-binding | 37 | 63 | 7.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.487 |
| SRR1783600 | control | 2.567 |
| SRR1783602 | moderate drought stress | 2.103 |
| SRR1811619 | moderate drought stress | 2.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.906 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.833 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.375 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.475 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.433 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.567 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.268 |
| SRR2967015 | Control (Tissue:root) | 9.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.545 |
| SRR9715740 | Leave | 1.335 |
| SRR9715741 | Leave | 1.376 |
| SRR9715739 | Root | 1.470 |
| SRR9715742 | Root | 3.972 |
| SRR9715743 | Root | 1.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.091 |
| SRR8749028 | MeJA induced 9h | 7.184 |
| SRR8749029 | MeJA induced 9h | 1.500 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 0.412 |
| SRR8749032 | Uninduced | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.925 |
| SRR8400027 | Control-Root | 12.000 |