Gene detail information of Glyur000457s00032729.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49475.1 | 1.00E-18 | AP2/B3-like transcriptional factor family protein |
| NR | XP_006586586.1 | 3.22E-96 | PREDICTED: B3 domain-containing transcription factor VRN1-like [Glycine max] |
| Swissprot | tr|Q9XIB4|Y1475_ARATH | 2.00E-21 | B3 domain-containing protein At1g49475 |
| trEMBL | tr|I1KYP5|I1KYP5_SOYBN | 5.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G44640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00457 | 71162 | 73496 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000457s00032729.1 | PF02362.16 | B3 | 40 | 116 | 1.80E-14 |
| Glyur000457s00032729.1 | PF02362.16 | B3 | 189 | 271 | 1.50E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.128 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.127 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.397 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.387 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.130 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.025 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.005 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.189 |
| SRR8749028 | MeJA induced 9h | 0.100 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.115 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.014 |
| SRR8400027 | Control-Root | 0.020 |