Gene detail

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Gene detail information of Glyur000462s00025052.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G61430.1	1.00E-84	NAC domain containing protein 100
NR	XP_003543855.1	3.89E-157	PREDICTED: NAC domain-containing protein 100-like [Glycine max]
Swissprot	tr\|Q9FLJ2\|NC100_ARATH	2.00E-107	NAC domain-containing protein 100
trEMBL	tr\|I1LWL6\|I1LWL6_SOYBN	1.00E-157	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G05540.1}

Sequence

Transcript Sequence

>Glyur000462s00025052.1
ATGGAGGAAGCAATGGACCAGAAATTTGAATTGCCACCAGGATTCAGGTTTCATCCAACAGATGAAGAACTCATAACTCACTACCTCTCTCAGAAGGTTCTAGATAGCTGCTTCTGTGCTAGAGCCATTGGAGAAGCTGATTTGAACAAGTGTGAACCATGGGATTTGCCTTGGAGGGCCAAAATGGGTGAAAAGGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCTAAGGACAAATAGGGCCACTGGTGCAGGCTACTGGAAGGCCACAGGCAAAGACAAGGAGATATACAGGGCTAAAGCACTTATTGGGATGAAGAAAACCTTGGTTTTCTACAAAGGTAGAGCACCAAAAGGTGAAAAAACAAACTGGGTCATGCATGAATACAGATTGGAGGATAAACATCATTCCATGCATAATCTACCCAAAAGGGCTATGAATGAGTGGGCCATATGCAGAGTTTTTGAGAAGGGTTCATGTGGGGTAAAGAAAATGCATGTTCCTGAGTTGGTGAGGTTCAACTCCTCCTTTGGAAAGGAACTTCCTCCCTTGATGGATGATTCTTCACCACCATACAACAACAACAACAATAGTGAAACAAAAACCATTGTTGGGGAGTCATCACATGTGACATGCTTCTCTGAGGATCAAAAGACACAACAAGATGACAACAACAACAACATAGTTGTTGATAGCTTTGAAACTCCTCCTATCTTAGCATCATCCTCATATTATTCTTCAATAAACCCCTCTTCTGATATTTTCTCCCCTGCCCCTATTGTGTTTCACCAAACTACAACACAAGAATTTGGGAATTCACAATGCTCAGATTCTTTTGTGATTCATGATCAACAATCCATGTTGAGGATGTTGATTGAAAACCATGGATATTCAAATAGTACAAAGCCAAAAATTCAGAAAGTTCAGGAAAGAGACTTTGATGCTGACATGTCATTATCATCTGTGATGATGTACAACAACAATGAAATGTTTCAAAGATCATTTGGGAATAACAATAACCAGGAATATTCATCAGCTTCTTCAGTTGGACATGTGGACACTACTAGTTGCCTATGGAACTTCTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00462	86631	88062	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000462s00025052.1	PF02365.10	NAM	11	137	3.00E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.100
SRR1783600	control	0.100
SRR1783602	moderate drought stress	0.066
SRR1811619	moderate drought stress	0.095

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.041
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.349
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.330

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.551
SRR2868004	Drought Stress(Tissue:root)	0.373
SRR2967015	Control (Tissue:root)	0.493

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.589
SRR9715740	Leave	0.229
SRR9715741	Leave	0.171
SRR9715739	Root	0.000
SRR9715742	Root	0.091
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	45.728
SRR8749028	MeJA induced 9h	74.492
SRR8749029	MeJA induced 9h	21.377
SRR8749030	Uninduced	83.772
SRR8749031	Uninduced	34.604
SRR8749032	Uninduced	11.681

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.490
SRR8400027	Control-Root	0.136