Gene detail information of Glyur000462s00025059.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66370.1 | 3.00E-29 | myb domain protein 113 |
| NR | XP_004489415.1 | 3.48E-55 | PREDICTED: transcription factor MYB90-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9FNV9|MY113_ARATH | 7.00E-35 | Transcription factor MYB113 |
| trEMBL | tr|K7LFP1|K7LFP1_SOYBN | 6.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G36966.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00462 | 148920 | 159372 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000462s00025059.1 | PF00249.26 | Myb_DNA-binding | 10 | 57 | 9.90E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.653 |
| SRR1783600 | control | 4.415 |
| SRR1783602 | moderate drought stress | 2.973 |
| SRR1811619 | moderate drought stress | 2.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.396 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.550 |
| SRR2967015 | Control (Tissue:root) | 0.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.324 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.958 |
| SRR9715742 | Root | 1.430 |
| SRR9715743 | Root | 0.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.911 |
| SRR8400027 | Control-Root | 5.430 |