Gene detail information of Glyur000464s00022390.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36920.22.00E-102Integrase-type DNA-binding superfamily protein
NRXP_007155905.10hypothetical protein PHAVU_003G241900g [Phaseolus vulgaris]
Swissprottr|P47927|AP2_ARATH2.00E-134Floral homeotic protein APETALA 2
trEMBLtr|V7CCN3|V7CCN3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27899.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0046457729582-


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2
EAR motif-containing ProteinsAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000464s00022390.1PF00847.15AP21752242.20E-14
Glyur000464s00022390.1PF00847.15AP22673172.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.759
SRR1783600control36.558
SRR1783602moderate drought stress53.643
SRR1811619moderate drought stress53.183

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.389
DRR006520Root Summer glycyrrhizin high producing strain5.512
DRR006521Root Winter glycyrrhizin high producing strain8.173
DRR006522Root Winter glycyrrhizin high producing strain8.103
DRR006523Root Summer glycyrrhizin low producing strain11.829
DRR006524Root Summer glycyrrhizin low producing strain12.089
DRR006525Leaf Summer glycyrrhizin high producing strain20.078
DRR006526Leaf Summer glycyrrhizin high producing strain19.631

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.823
SRR2868004Drought Stress(Tissue:root)45.646
SRR2967015Control (Tissue:root)62.896

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.231
SRR9715740Leave24.222
SRR9715741Leave21.431
SRR9715739Root2.682
SRR9715742Root17.192
SRR9715743Root13.698

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.202
SRR8749028MeJA induced 9h24.396
SRR8749029MeJA induced 9h18.961
SRR8749030Uninduced36.589
SRR8749031Uninduced27.502
SRR8749032Uninduced28.410

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.977
SRR8400027Control-Root44.133

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved