Gene detail information of Glyur000464s00022396.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23340.11.00E-40DREB and EAR motif protein 3
NRXP_003551002.13.89E-74PREDICTED: ethylene-responsive transcription factor ERF008-like [Glycine max]
Swissprottr|O22174|ERF08_ARATH2.00E-54Ethylene-responsive transcription factor ERF008
trEMBLtr|I1MVU7|I1MVU7_SOYBN1.00E-74Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G18580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004645266253123-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF
EAR motif-containing ProteinsERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000464s00022396.1PF00847.15AP223731.10E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.830
SRR1783600control34.173
SRR1783602moderate drought stress62.364
SRR1811619moderate drought stress61.947

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.646
DRR006520Root Summer glycyrrhizin high producing strain43.056
DRR006521Root Winter glycyrrhizin high producing strain80.120
DRR006522Root Winter glycyrrhizin high producing strain80.319
DRR006523Root Summer glycyrrhizin low producing strain22.071
DRR006524Root Summer glycyrrhizin low producing strain20.155
DRR006525Leaf Summer glycyrrhizin high producing strain4.105
DRR006526Leaf Summer glycyrrhizin high producing strain4.337

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.544
SRR2868004Drought Stress(Tissue:root)37.915
SRR2967015Control (Tissue:root)55.107

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.113
SRR9715740Leave12.117
SRR9715741Leave12.104
SRR9715739Root115.389
SRR9715742Root66.463
SRR9715743Root55.277

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.022
SRR8749028MeJA induced 9h4.582
SRR8749029MeJA induced 9h1.933
SRR8749030Uninduced0.905
SRR8749031Uninduced1.313
SRR8749032Uninduced4.049

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.827
SRR8400027Control-Root66.187

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved