Gene detail information of Glyur000464s00022401.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67200.10Leucine-rich repeat protein kinase family protein
NRXP_004509114.10PREDICTED: probable inactive receptor kinase At5g67200-like [Cicer arietinum]
COGYP_001958461.16.00E-19hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q93Y06|Y5720_ARATH0Probable inactive receptor kinase At5g67200 (Precursor)
trEMBLtr|A0A072UNS4|A0A072UNS4_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH31469.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004649414897885-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000464s00022401.1PF00560.28LRR_11171361
Glyur000464s00022401.1PF00069.20Pkinase3926435.50E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.145
SRR1783600control29.431
SRR1783602moderate drought stress27.837
SRR1811619moderate drought stress27.816

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.442
DRR006520Root Summer glycyrrhizin high producing strain29.330
DRR006521Root Winter glycyrrhizin high producing strain3.557
DRR006522Root Winter glycyrrhizin high producing strain3.663
DRR006523Root Summer glycyrrhizin low producing strain28.434
DRR006524Root Summer glycyrrhizin low producing strain28.376
DRR006525Leaf Summer glycyrrhizin high producing strain3.558
DRR006526Leaf Summer glycyrrhizin high producing strain3.687

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.081
SRR2868004Drought Stress(Tissue:root)12.541
SRR2967015Control (Tissue:root)12.780

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.129
SRR9715740Leave2.019
SRR9715741Leave2.298
SRR9715739Root14.104
SRR9715742Root35.096
SRR9715743Root32.256

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.344
SRR8749028MeJA induced 9h0.759
SRR8749029MeJA induced 9h0.643
SRR8749030Uninduced0.698
SRR8749031Uninduced0.126
SRR8749032Uninduced0.066

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.182
SRR8400027Control-Root36.348

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved