Gene detail information of Glyur000466s00022908.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25820.1 | 2.00E-156 | Exostosin family protein |
| NR | XP_003527839.1 | 0 | PREDICTED: probable glycosyltransferase At5g03795-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FFN2|GLYT3_ARATH | 5.00E-88 | Probable glycosyltransferase At5g03795 |
| trEMBL | tr|K7KTX9|K7KTX9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08960.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00466 | 136923 | 144795 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000466s00022908.3 | PF03016.10 | Exostosin | 281 | 562 | 1.90E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.294 |
| SRR1783600 | control | 11.123 |
| SRR1783602 | moderate drought stress | 14.212 |
| SRR1811619 | moderate drought stress | 16.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.026 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.575 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.853 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.712 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.064 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.796 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.253 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.096 |
| SRR2967015 | Control (Tissue:root) | 16.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.449 |
| SRR9715740 | Leave | 8.034 |
| SRR9715741 | Leave | 9.125 |
| SRR9715739 | Root | 1.740 |
| SRR9715742 | Root | 7.875 |
| SRR9715743 | Root | 6.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.649 |
| SRR8749028 | MeJA induced 9h | 15.475 |
| SRR8749029 | MeJA induced 9h | 12.540 |
| SRR8749030 | Uninduced | 13.184 |
| SRR8749031 | Uninduced | 20.146 |
| SRR8749032 | Uninduced | 18.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.303 |
| SRR8400027 | Control-Root | 18.703 |