Gene detail information of Glyur000468s00019620.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06490.10glucan synthase-like 7
NRXP_004499983.10PREDICTED: callose synthase 7-like [Cicer arietinum]
Swissprottr|Q9LYS6|CALS6_ARATH0Putative callose synthase 6
trEMBLtr|G7IXI4|G7IXI4_MEDTR0Callose synthase-like protein {ECO:0000313|EMBL:AES70070.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00468307020810+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000468s00019620.1PF04652.11DUF605521746.60E-07
Glyur000468s00019620.1PF14288.1FKS1_dom13334457.60E-41
Glyur000468s00019620.1PF02364.10Glucan_synthase103811306.10E-26
Glyur000468s00019620.1PF02364.10Glucan_synthase113413051.60E-42
Glyur000468s00019620.1PF02364.10Glucan_synthase131414093.80E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.236
SRR1783600control2.178
SRR1783602moderate drought stress3.395
SRR1811619moderate drought stress3.322

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.520
DRR006520Root Summer glycyrrhizin high producing strain3.649
DRR006521Root Winter glycyrrhizin high producing strain1.359
DRR006522Root Winter glycyrrhizin high producing strain1.416
DRR006523Root Summer glycyrrhizin low producing strain4.022
DRR006524Root Summer glycyrrhizin low producing strain3.700
DRR006525Leaf Summer glycyrrhizin high producing strain1.697
DRR006526Leaf Summer glycyrrhizin high producing strain1.477

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.969
SRR2868004Drought Stress(Tissue:root)14.457
SRR2967015Control (Tissue:root)13.500

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.448
SRR9715740Leave1.285
SRR9715741Leave1.857
SRR9715739Root0.277
SRR9715742Root6.700
SRR9715743Root4.899

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.607
SRR8749028MeJA induced 9h2.441
SRR8749029MeJA induced 9h0.813
SRR8749030Uninduced1.193
SRR8749031Uninduced0.739
SRR8749032Uninduced0.760

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.693
SRR8400027Control-Root9.662

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved