Gene detail information of Glyur000469s00029361.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39830.16.00E-31DA1-related protein 2
NRXP_003600792.12.61E-50LIM and UIM domain-containing [Medicago truncatula]
Swissprottr|Q0WSN2|DAR2_ARATH5.00E-41Protein DA1-related 2
trEMBLtr|G7JA19|G7JA19_MEDTR2.00E-50Zinc ion-binding protein {ECO:0000313|EMBL:AES71043.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00469146745152380-


Gene family

Gene familysubfamily
Transcription Factors FamilyLIM


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000469s00029361.2PF00412.17LIM1081592.80E-07
Glyur000469s00029361.2PF12315.3DUF36332172675.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.143
SRR1783600control2.900
SRR1783602moderate drought stress2.861
SRR1811619moderate drought stress2.823

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.420
DRR006520Root Summer glycyrrhizin high producing strain3.520
DRR006521Root Winter glycyrrhizin high producing strain0.559
DRR006522Root Winter glycyrrhizin high producing strain0.485
DRR006523Root Summer glycyrrhizin low producing strain5.267
DRR006524Root Summer glycyrrhizin low producing strain5.312
DRR006525Leaf Summer glycyrrhizin high producing strain3.561
DRR006526Leaf Summer glycyrrhizin high producing strain3.815

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.704
SRR2868004Drought Stress(Tissue:root)5.714
SRR2967015Control (Tissue:root)8.270

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.859
SRR9715740Leave6.563
SRR9715741Leave10.494
SRR9715739Root2.801
SRR9715742Root6.318
SRR9715743Root3.724

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.302
SRR8749028MeJA induced 9h3.858
SRR8749029MeJA induced 9h2.622
SRR8749030Uninduced0.864
SRR8749031Uninduced1.013
SRR8749032Uninduced1.127

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.722
SRR8400027Control-Root4.689

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved