Gene detail information of Glyur000470s00020945.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45550.13.00E-76cytochrome P450, family 76, subfamily C, polypeptide 4
NRAET02720.20cytochrome P450 family protein [Medicago truncatula]
COGYP_003265754.11.00E-27cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprottr|Q8VWZ7|C76B6_CATRO3.00E-106Geraniol 8-hydroxylase
trEMBLtr|G7L8J6|G7L8J6_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:AET02720.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004703190634273+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000470s00020945.1PF00067.17p45042972.90E-10
Glyur000470s00020945.1PF00067.17p450932882.70E-29
Glyur000470s00020945.1PF00067.17p4502893842.90E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.345
SRR1783600control2.505
SRR1783602moderate drought stress0.609
SRR1811619moderate drought stress0.580

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.078
DRR006520Root Summer glycyrrhizin high producing strain0.184
DRR006521Root Winter glycyrrhizin high producing strain15.125
DRR006522Root Winter glycyrrhizin high producing strain14.914
DRR006523Root Summer glycyrrhizin low producing strain0.171
DRR006524Root Summer glycyrrhizin low producing strain0.239
DRR006525Leaf Summer glycyrrhizin high producing strain3.725
DRR006526Leaf Summer glycyrrhizin high producing strain3.496

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.229
SRR2868004Drought Stress(Tissue:root)15.006
SRR2967015Control (Tissue:root)5.271

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave52.410
SRR9715740Leave14.516
SRR9715741Leave76.577
SRR9715739Root1.284
SRR9715742Root8.643
SRR9715743Root7.231

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.952
SRR8749028MeJA induced 9h11.405
SRR8749029MeJA induced 9h2.060
SRR8749030Uninduced22.128
SRR8749031Uninduced53.670
SRR8749032Uninduced13.965

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.422
SRR8400027Control-Root9.883

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved