Gene detail information of Glyur000470s00020952.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07620.1 | 8.00E-123 | Protein kinase superfamily protein |
| NR | XP_003531799.1 | 0 | PREDICTED: putative kinase-like protein TMKL1-like isoform X1 [Glycine max] |
| COG | YP_006805216.1 | 1.00E-15 | serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358] |
| Swissprot | tr|P33543|TMKL1_ARATH | 1.00E-64 | Putative kinase-like protein TMKL1 (Precursor) |
| trEMBL | tr|I1KW09|I1KW09_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G24850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00470 | 78197 | 81332 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.Other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000470s00020952.1 | PF00069.20 | Pkinase | 77 | 351 | 4.80E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.206 |
| SRR1783600 | control | 11.119 |
| SRR1783602 | moderate drought stress | 8.886 |
| SRR1811619 | moderate drought stress | 8.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.189 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.590 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.767 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.511 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.631 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.654 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.993 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.720 |
| SRR2967015 | Control (Tissue:root) | 11.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.504 |
| SRR9715740 | Leave | 15.773 |
| SRR9715741 | Leave | 9.355 |
| SRR9715739 | Root | 1.428 |
| SRR9715742 | Root | 4.653 |
| SRR9715743 | Root | 3.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.937 |
| SRR8749028 | MeJA induced 9h | 2.999 |
| SRR8749029 | MeJA induced 9h | 1.644 |
| SRR8749030 | Uninduced | 0.214 |
| SRR8749031 | Uninduced | 0.033 |
| SRR8749032 | Uninduced | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.936 |
| SRR8400027 | Control-Root | 14.695 |