Gene detail information of Glyur000470s00020963.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G12680.14.00E-145floral homeotic protein (HUA1)
NRXP_004517028.10PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X2 [Cicer arietinum]
Swissprottr|Q941Q3|C3H37_ARATH3.00E-178Zinc finger CCCH domain-containing protein 37
trEMBLtr|K7MCY1|K7MCY1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G30265.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00470137139144257-


Gene family

Gene familysubfamily
Transcription Factors FamilyC3H


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0046872  metal ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000470s00020963.1PF00642.19zf-CCCH1461705.20E-08
Glyur000470s00020963.1PF00642.19zf-CCCH1972231.20E-09
Glyur000470s00020963.1PF00642.19zf-CCCH2412641.30E-09
Glyur000470s00020963.1PF00642.19zf-CCCH3173401.70E-10
Glyur000470s00020963.1PF00642.19zf-CCCH4014241.20E-10
Glyur000470s00020963.1PF00642.19zf-CCCH4544781.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.916
SRR1783600control20.218
SRR1783602moderate drought stress20.663
SRR1811619moderate drought stress20.414

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.667
DRR006520Root Summer glycyrrhizin high producing strain23.523
DRR006521Root Winter glycyrrhizin high producing strain13.144
DRR006522Root Winter glycyrrhizin high producing strain12.871
DRR006523Root Summer glycyrrhizin low producing strain25.526
DRR006524Root Summer glycyrrhizin low producing strain25.718
DRR006525Leaf Summer glycyrrhizin high producing strain14.345
DRR006526Leaf Summer glycyrrhizin high producing strain14.876

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.949
SRR2868004Drought Stress(Tissue:root)26.116
SRR2967015Control (Tissue:root)24.846

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.802
SRR9715740Leave15.253
SRR9715741Leave16.434
SRR9715739Root14.119
SRR9715742Root15.186
SRR9715743Root14.127

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.593
SRR8749028MeJA induced 9h29.598
SRR8749029MeJA induced 9h24.924
SRR8749030Uninduced18.819
SRR8749031Uninduced10.068
SRR8749032Uninduced15.306

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.252
SRR8400027Control-Root25.635

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved