Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000470s00020964.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G79250.2	2.00E-173	AGC kinase 1.7
NR	XP_004509995.1	0	PREDICTED: protein kinase PVPK-1-like [Cicer arietinum]
COG	YP_007162414.1	1.00E-21	serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605]
Swissprot	tr\|Q1PFB9\|AGC17_ARATH	0	Serine/threonine-protein kinase AGC1-7 {ECO:0000305}
trEMBL	tr\|I1KW28\|I1KW28_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G25070.1}

Sequence

Transcript Sequence

>Glyur000470s00020964.1
ATGAGTAACAGTTTGTCAGAAGAAGCTCACNAGACAGATCATAGTAGTGCAAATGATCCAGAAGGTGATCAAGCTAGAAAGGTGAATCAAGCATCCCAAGATGCTTTCACAAATGAGATCACAACAAGTAGTATTGGAGCTGCACAAATAGACCAGTTTGTTTCTAGAAACAACAATGCAAAGAATACCACAAGTAAACCAACATCATCTAAACCTCAGAAGTTAGAATCACCTATGAGGAGGAATTTCTCTGAATTTTCCACTACTCAACGCCAATGTCCAAGTGCAAGGATGGCTTCAAATAATTCAGACCCTTCAACGACAACCACATCATCAAGGGAATTCCAAATGCCAACAACAAAGACCACAAACCAAGGCCATCATAGGAGTGGTACTAGTTCCCGTAGTGATAGTCTAGAGAGCACAAGTAGTAGTACACACATTAAGCCACATACAGGAGGTGATGTTAGGTGGGATGCAATTAACATGGTTTCAAAGGGATCTAGTCTTAACCATAGCCATTTCAGGCTTGTAAAGCTTGTTGGGTATGGAGACATTGGAAGTGTATACCTTGTGGAACTTAAAGGAACTGGTGCATTCTTTGCCATGAAAGTAATGGATAAGGCCTCTCTTGCAAGCAGAAACAAGCTTCTGAGAGCACAAACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCTTTTGTTCCCACTTTATATTCCTATTTTGAAACTGACAAGCATTACTGTTTGGTCATGGAATTCTGTAGTTGTGGTAGCCTGCATTCCCTTCGATTGAAGCAACCCAACAAGCATTTCACTGAAGAAGCTGCAAGGTTTTACTGTTCAGAGATTTTGCTAGCTCTAGAGTATCTACACATGCTAGGCATTGTGTACAGAGACTTAAAGCCAGAGAATGTTCTGGTTCGAGATGAAGGCCACATCATGCTATCAGATTTCGACCTATCCCTTCGGGGAGGCATCTTGGATGATGACCACGTTGTGCAGGGATGCATGCAGCCAGCATCAAGCTTCTTCCCACGCATCCTCACTTCAAAGAGGAACCGAAAGTCAAAGTCAGATTTCGGCCTAGCTGGAGGGGTTCGCCTCCCTGAGCTTATGGCAGAGCCCACGAACGTGCGGTCCATGTCNTTCGTGGGGACACACGAGTACCTCGCCCCGGAGATCATCCGTGGCGAGGGACACGGGAGTGCAGTGGATTGGTGGACTTTTGGGATCTTTCTCTANGAACTCTTGCACGGGACAACACCGTTTAAGGGTGCTGGGAACCGTGCCACGCTGTTCAACGTCATTGGACAGCCATTGCGGTTCCCAGAGACACCACGCGTGAGTGGGGTGGCGAGGGACCTCATAAGGGGGCTTTTGGTGAAAGAGCCTCAGAAACGATTTGCTTATAAGCGGGGTGCTACGGAGATAAAGCAACACCCNTTTTTTGAAGGGGTGAATTGGGCTCTGATTAGAAGTGTCACACCTCCTATCATACCTGAACATGTTGATTTTTCACAGTATCTTAGCAAGGAAACCGTGGCCCCGCCAGTAGTAGATAATAAGATGGCAAATGTTGCTAGTGATGATAACAATAGAAACAACAACAATACACAAGAACCTGATCCTTCTTATGAAGATTTTGAGTATTTTTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00470	146500	149995	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0004674 protein serine/threonine kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000470s00020964.1	PF00069.20	Pkinase	175	323	3.90E-36
Glyur000470s00020964.1	PF00069.20	Pkinase	348	484	2.40E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.061
SRR1783600	control	0.043
SRR1783602	moderate drought stress	0.012
SRR1811619	moderate drought stress	0.023

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.066
DRR006524	Root Summer glycyrrhizin low producing strain	0.066
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.028
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.028

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.490
SRR2868004	Drought Stress(Tissue:root)	0.487
SRR2967015	Control (Tissue:root)	0.534

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.040
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.030
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.018
SRR8749031	Uninduced	0.143
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.838
SRR8400027	Control-Root	0.658