Gene detail information of Glyur000471s00019782.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G03150.11.00E-90Acyl-CoA N-acyltransferases (NAT) superfamily protein
NRBAE71298.11.17E-115hypothetical protein [Trifolium pratense]
COGYP_003859178.12.00E-1550S ribosomal protein S18 alanine acetyltransferase [Ignisphaera aggregans DSM 17230]
trEMBLtr|Q2PEQ4|Q2PEQ4_TRIPR4.00E-116Putative uncharacterized protein {ECO:0000313|EMBL:BAE71298.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00471105528109757+


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0008080  N-acetyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000471s00019782.1PF00583.19Acetyltransf_11091771.60E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.314
SRR1783600control12.667
SRR1783602moderate drought stress10.683
SRR1811619moderate drought stress10.667

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.082
DRR006520Root Summer glycyrrhizin high producing strain21.021
DRR006521Root Winter glycyrrhizin high producing strain14.164
DRR006522Root Winter glycyrrhizin high producing strain14.455
DRR006523Root Summer glycyrrhizin low producing strain22.250
DRR006524Root Summer glycyrrhizin low producing strain21.846
DRR006525Leaf Summer glycyrrhizin high producing strain7.052
DRR006526Leaf Summer glycyrrhizin high producing strain6.950

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.465
SRR2868004Drought Stress(Tissue:root)24.697
SRR2967015Control (Tissue:root)21.465

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.529
SRR9715740Leave21.544
SRR9715741Leave19.639
SRR9715739Root12.326
SRR9715742Root11.287
SRR9715743Root13.300

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.957
SRR8749028MeJA induced 9h13.234
SRR8749029MeJA induced 9h19.864
SRR8749030Uninduced12.280
SRR8749031Uninduced7.677
SRR8749032Uninduced11.231

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.692
SRR8400027Control-Root19.968

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved