Gene detail information of Glyur000472s00019571.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62420.17.00E-37basic region/leucine zipper motif 53
NRNP_001237222.15.98E-70bZIP transcription factor bZIP41 [Glycine max]
Swissprottr|P24068|OCS1_MAIZE8.00E-31Ocs element-binding factor 1
trEMBLtr|Q0GPF1|Q0GPF1_SOYBN2.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G40390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004721154911980-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000472s00019571.1PF00170.16bZIP_122782.00E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control89.298
SRR1783600control89.447
SRR1783602moderate drought stress138.347
SRR1811619moderate drought stress138.959

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain176.859
DRR006520Root Summer glycyrrhizin high producing strain172.406
DRR006521Root Winter glycyrrhizin high producing strain36.934
DRR006522Root Winter glycyrrhizin high producing strain35.427
DRR006523Root Summer glycyrrhizin low producing strain272.128
DRR006524Root Summer glycyrrhizin low producing strain276.847
DRR006525Leaf Summer glycyrrhizin high producing strain91.106
DRR006526Leaf Summer glycyrrhizin high producing strain89.254

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)183.269
SRR2868004Drought Stress(Tissue:root)374.409
SRR2967015Control (Tissue:root)311.276

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave312.524
SRR9715740Leave201.059
SRR9715741Leave392.664
SRR9715739Root324.503
SRR9715742Root319.673
SRR9715743Root318.486

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h634.958
SRR8749028MeJA induced 9h470.311
SRR8749029MeJA induced 9h622.685
SRR8749030Uninduced670.317
SRR8749031Uninduced1305.253
SRR8749032Uninduced1811.977

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root125.448
SRR8400027Control-Root127.173

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved