Gene detail information of Glyur000473s00018942.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01490.12.00E-167Protein kinase superfamily protein
NRKEH24853.10Serine/Threonine-kinase HT1-like protein [Medicago truncatula]
COGYP_001958461.12.00E-22hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH2.00E-54Serine/threonine-protein kinase HT1
trEMBLtr|A0A072U6Y5|A0A072U6Y5_MEDTR0Serine/Threonine-kinase HT1-like protein {ECO:0000313|EMBL:KEH24853.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004736082865440+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000473s00018942.1PF07714.12Pkinase_Tyr703171.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.288
SRR1783600control14.263
SRR1783602moderate drought stress14.853
SRR1811619moderate drought stress14.940

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.180
DRR006520Root Summer glycyrrhizin high producing strain19.552
DRR006521Root Winter glycyrrhizin high producing strain19.296
DRR006522Root Winter glycyrrhizin high producing strain18.986
DRR006523Root Summer glycyrrhizin low producing strain12.377
DRR006524Root Summer glycyrrhizin low producing strain12.054
DRR006525Leaf Summer glycyrrhizin high producing strain5.857
DRR006526Leaf Summer glycyrrhizin high producing strain5.544

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.048
SRR2868004Drought Stress(Tissue:root)17.631
SRR2967015Control (Tissue:root)19.100

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.654
SRR9715740Leave5.414
SRR9715741Leave5.187
SRR9715739Root2.558
SRR9715742Root28.310
SRR9715743Root22.243

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.777
SRR8749028MeJA induced 9h70.935
SRR8749029MeJA induced 9h47.812
SRR8749030Uninduced20.139
SRR8749031Uninduced17.816
SRR8749032Uninduced18.050

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.749
SRR8400027Control-Root48.418

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved