Gene detail information of Glyur000474s00038877.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47750.10D6 protein kinase like 2
NRXP_006604033.10PREDICTED: protein kinase PVPK-1-like isoform X1 [Glycine max]
COGYP_004178129.13.00E-21serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|P15792|KPK1_PHAVU0Protein kinase PVPK-1
trEMBLtr|K7MWU9|K7MWU9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G10160.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004745616560558+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000474s00038877.1PF00069.20Pkinase2423982.50E-37
Glyur000474s00038877.1PF00069.20Pkinase4735805.50E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.808
SRR1783600control9.895
SRR1783602moderate drought stress10.603
SRR1811619moderate drought stress10.522

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.582
DRR006520Root Summer glycyrrhizin high producing strain11.503
DRR006521Root Winter glycyrrhizin high producing strain8.871
DRR006522Root Winter glycyrrhizin high producing strain8.696
DRR006523Root Summer glycyrrhizin low producing strain13.520
DRR006524Root Summer glycyrrhizin low producing strain13.251
DRR006525Leaf Summer glycyrrhizin high producing strain7.971
DRR006526Leaf Summer glycyrrhizin high producing strain8.050

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.036
SRR2868004Drought Stress(Tissue:root)21.050
SRR2967015Control (Tissue:root)29.079

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.697
SRR9715740Leave5.602
SRR9715741Leave8.077
SRR9715739Root5.669
SRR9715742Root9.194
SRR9715743Root9.284

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.350
SRR8749028MeJA induced 9h18.710
SRR8749029MeJA induced 9h15.063
SRR8749030Uninduced10.233
SRR8749031Uninduced13.770
SRR8749032Uninduced8.838

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.237
SRR8400027Control-Root16.734

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved