Gene detail information of Glyur000476s00022366.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66150.10transmembrane kinase 1
NRXP_003552883.20PREDICTED: probable receptor protein kinase TMK1-like [Glycine max]
COGYP_004335154.12.00E-24serine/threonine protein kinase [Pseudonocardia dioxanivorans CB1190]
Swissprottr|P43298|TMK1_ARATH0Probable receptor protein kinase TMK1 (Precursor)
trEMBLtr|I1MZG4|I1MZG4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G04780.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00476988113871-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000476s00022366.1PF08263.7LRRNT_21411752.90E-05
Glyur000476s00022366.1PF13855.1LRR_82052623.40E-09
Glyur000476s00022366.1PF13855.1LRR_83514091.40E-06
Glyur000476s00022366.1PF08263.7LRRNT_24444780.0012
Glyur000476s00022366.1PF00560.28LRR_15055240.77
Glyur000476s00022366.1PF00069.20Pkinase7049772.10E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.328
SRR1783600control11.475
SRR1783602moderate drought stress8.492
SRR1811619moderate drought stress8.449

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.652
DRR006520Root Summer glycyrrhizin high producing strain11.585
DRR006521Root Winter glycyrrhizin high producing strain7.258
DRR006522Root Winter glycyrrhizin high producing strain7.072
DRR006523Root Summer glycyrrhizin low producing strain7.354
DRR006524Root Summer glycyrrhizin low producing strain7.585
DRR006525Leaf Summer glycyrrhizin high producing strain18.463
DRR006526Leaf Summer glycyrrhizin high producing strain18.351

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.129
SRR2868004Drought Stress(Tissue:root)15.957
SRR2967015Control (Tissue:root)17.910

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.400
SRR9715740Leave2.655
SRR9715741Leave3.125
SRR9715739Root11.124
SRR9715742Root9.428
SRR9715743Root9.689

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.849
SRR8749028MeJA induced 9h10.284
SRR8749029MeJA induced 9h6.795
SRR8749030Uninduced2.114
SRR8749031Uninduced0.291
SRR8749032Uninduced0.565

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.809
SRR8400027Control-Root14.148

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved