Gene detail information of Glyur000476s00022386.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53380.10Concanavalin A-like lectin protein kinase family protein
NRXP_007146994.10hypothetical protein PHAVU_006G087700g [Phaseolus vulgaris]
COGYP_004571825.17.00E-23serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9LFH9|LRK81_ARATH0L-type lectin-domain containing receptor kinase VIII.1 (Precursor)
trEMBLtr|V7BPM9|V7BPM9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW18988.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00476141898143934+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000476s00022386.1PF00139.14Lectin_legB242447.10E-56
Glyur000476s00022386.1PF00069.20Pkinase3495493.20E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.015
SRR1783600control3.032
SRR1783602moderate drought stress1.466
SRR1811619moderate drought stress1.406

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.269
DRR006520Root Summer glycyrrhizin high producing strain1.285
DRR006521Root Winter glycyrrhizin high producing strain0.278
DRR006522Root Winter glycyrrhizin high producing strain0.267
DRR006523Root Summer glycyrrhizin low producing strain0.757
DRR006524Root Summer glycyrrhizin low producing strain0.737
DRR006525Leaf Summer glycyrrhizin high producing strain0.352
DRR006526Leaf Summer glycyrrhizin high producing strain0.364

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.162
SRR2868004Drought Stress(Tissue:root)1.877
SRR2967015Control (Tissue:root)2.530

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.759
SRR9715740Leave0.074
SRR9715741Leave0.176
SRR9715739Root5.111
SRR9715742Root2.108
SRR9715743Root2.732

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.700
SRR8749028MeJA induced 9h0.776
SRR8749029MeJA induced 9h0.957
SRR8749030Uninduced0.372
SRR8749031Uninduced0.318
SRR8749032Uninduced0.301

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.204
SRR8400027Control-Root4.444

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved